Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DDX17DEAD-box helicase 17; Belongs to the DEAD box helicase family. (650 aa)    
Predicted Functional Partners:
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 
 0.995
SF1
Splicing factor 1.
   
 0.911
DHX9
DExH-box helicase 9.
   
 0.909
RBM39
RNA binding motif protein 39.
   
 0.893
DROSHA
Drosha ribonuclease III.
   
 
 0.886
ESR1
Estrogen receptor 1.
    
 0.871
WBP11
WW domain binding protein 11.
   
  0.870
ALYREF
Aly/REF export factor.
   
 0.870
FUS
FUS RNA binding protein.
   
 0.862
DDX3Y
DEAD-box helicase 3 Y-linked; Belongs to the DEAD box helicase family.
   
 0.860
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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