STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BOCBOC cell adhesion associated, oncogene regulated. (1115 aa)    
Predicted Functional Partners:
PTCH1
Patched 1.
    
 0.995
CDON
Cell adhesion associated, oncogene regulated.
   
0.993
DHH
Desert hedgehog signaling molecule.
    
 0.992
IHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.987
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.977
SMO
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 0.975
PTCH2
Patched 2.
    
 0.975
GAS1
Growth arrest specific 1.
   
 0.945
LRP2
LDL receptor related protein 2.
     
 0.907
CDO1
Cysteine dioxygenase.
     
 0.762
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.