Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMUB1Transmembrane and ubiquitin like domain containing 1. (246 aa)    
Predicted Functional Partners:
ERLIN2
ER lipid raft associated 2.
    
 
 0.920
RNF170
Ring finger protein 170.
    
 
 0.900
RNF185
Ring finger protein 185.
    
 
 0.877
ERLIN1
ER lipid raft associated 1.
    
 
 0.874
TMEM259
Transmembrane protein 259.
    
 
 0.782
TMUB2
Transmembrane and ubiquitin like domain containing 2.
    
   0.775
RNF5
Ring finger protein 5.
    
 
 0.760
C6orf120
Chromosome 6 open reading frame 120.
      
 0.674
AMFR
Autocrine motility factor receptor.
    
 
 0.632
FAM8A1
Family with sequence similarity 8 member A1.
      
 0.597
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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