STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USF3Upstream transcription factor family member 3. (2239 aa)    
Predicted Functional Partners:
MRPL34
Mitochondrial ribosomal protein L34.
    
 
 0.498
MRPL30
Ribosomal_L30 domain-containing protein.
    
 
 0.483
PSMG3
Proteasome assembly chaperone 3.
      
 0.476
RMND5A
Required for meiotic nuclear division 5 homolog A.
   
 
 0.470
TAB3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
  
    0.468
MRPL48
Mitochondrial ribosomal protein L48.
      
 0.456
MRPS14
Mitochondrial ribosomal protein S14.
    
 
 0.445
WDR18
WD repeat domain 18.
   
 0.441
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
 0.436
STARD9
StAR related lipid transfer domain containing 9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.429
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.