Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HCFC1Host cell factor C1. (2035 aa)    
Predicted Functional Partners:
HCFC2
Host cell factor C2.
    
 
0.993
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 0.990
BAP1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.988
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.982
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
   
 0.981
WDR5
WD repeat domain 5.
   
 0.981
SETD1A
SET domain containing 1A, histone lysine methyltransferase.
   
 0.980
KAT8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.971
CREB3
cAMP responsive element binding protein 3.
    
 
 0.957
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.949
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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