STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN16Tetraspanin 16; Belongs to the tetraspanin (TM4SF) family. (152 aa)    
Predicted Functional Partners:
TSPAN17
Tetraspanin.
      
 0.613
TSPAN19
Tetraspanin 19; Belongs to the tetraspanin (TM4SF) family.
      
 0.598
TSPAN31
Tetraspanin 31; Belongs to the tetraspanin (TM4SF) family.
      
 0.595
TSPAN2
Tetraspanin.
      
 0.494
TPM2
Uncharacterized protein; Belongs to the tropomyosin family.
      
 0.485
TRPC4
ANK_REP_REGION domain-containing protein.
      
 0.483
TRPC5
Transient receptor potential cation channel subfamily C member 5; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.480
TMEM239
Transmembrane protein 239.
   
    0.425
SEC61A1
SEC61 translocon alpha 1 subunit.
      
 0.419
SEC62
SEC62 homolog, preprotein translocation factor.
      
 0.411
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.