STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBFD1Ubiquitin family domain containing 1. (300 aa)    
Predicted Functional Partners:
PSMD12
Proteasome 26S subunit, non-ATPase 12.
   
 0.903
PSMC4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
   
 0.868
PSMC2
Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.
   
 0.861
PSMD7
Proteasome 26S subunit, non-ATPase 7.
   
 0.859
PSMC3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
   
 0.857
PSMC1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.848
PSMD6
Proteasome 26S subunit, non-ATPase 6.
   
 0.847
PSMC5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
 0.846
PSMD13
Proteasome 26S subunit, non-ATPase 13.
   
 0.841
PSMD11
Proteasome 26S subunit, non-ATPase 11.
   
 0.840
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.