Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM176ATransmembrane protein 176A. (232 aa)    
Predicted Functional Partners:
TMEM176B
Transmembrane protein 176B.
   
 
 0.985
MS4A5
Membrane spanning 4-domains A5.
      
 0.675
MS4A15
Membrane spanning 4-domains A15.
   
  
 0.628
MS4A12
Membrane spanning 4-domains A12.
   
  
 0.622
MS4A18
Membrane spanning 4-domains A18.
      
 0.609
CPXM1
Carboxypeptidase X, M14 family member 1.
      
 0.600
GDAP1L1
Ganglioside induced differentiation associated protein 1 like 1.
      
 0.600
MS4A8
Membrane spanning 4-domains A8.
   
  
 0.563
TMEM98
Transmembrane protein 98.
      
 0.541
TMEM47
Transmembrane protein 47.
      
 0.485
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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