STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COLEC11Collectin subfamily member 11. (304 aa)    
Predicted Functional Partners:
COLEC10
Collectin subfamily member 10.
   
 0.951
MASP1
Mannan binding lectin serine peptidase 1.
    
 0.948
MASP2
Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family.
    
 0.784
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
    
 
 0.703
C1S
Complement C1s; Belongs to the peptidase S1 family.
    
 0.627
C1R
Complement C1r; Belongs to the peptidase S1 family.
    
 0.624
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 
 0.560
C1RL
Complement C1r subcomponent like; Belongs to the peptidase S1 family.
    
 0.552
FCN3
Ficolin 3.
   
 0.536
CTSO
Cathepsin O; Belongs to the peptidase C1 family.
     
 0.506
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.