Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BARX1BARX homeobox 1. (254 aa)    
Predicted Functional Partners:
PEX6
Peroxisomal biogenesis factor 6.
   
  
 0.613
MYOM2
Myomesin 2.
   
  
 0.585
BCCIP
BRCA2 and CDKN1A interacting protein.
      
 0.584
FANCL
FA complementation group L.
      
 0.577
PEX7
Peroxisomal biogenesis factor 7.
      
 0.574
FANCM
FA complementation group M.
      
 0.561
TP53BP2
Tumor protein p53 binding protein 2.
    
 
 0.556
OSR2
Odd-skipped related transciption factor 2.
    
 
 0.509
CTBP1
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
      
 0.508
TTN
Titin.
      
 0.503
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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