STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM120AFamily with sequence similarity 120A. (1045 aa)    
Predicted Functional Partners:
UPF1
UPF1 RNA helicase and ATPase.
   
 
 0.808
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 
 0.802
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
    
   0.765
ZCCHC3
Zinc finger CCHC-type containing 3.
    
   0.756
IGF2BP1
Insulin like growth factor 2 mRNA binding protein 1.
    
 
 0.673
RBM45
RNA binding motif protein 45.
    
   0.651
PA2G4
Uncharacterized protein.
      
 0.650
FMR1
Fragile X mental retardation 1.
   
 
 0.627
STAU1
Staufen double-stranded RNA binding protein 1.
    
 
 0.621
IGF2BP2
Insulin like growth factor 2 mRNA binding protein 2.
    
 
 0.612
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.