STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PASD1PAS domain containing repressor 1. (771 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
   
 0.889
CRY2
Cryptochrome circadian regulator 2.
   
 0.882
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 0.856
CRY1
Cryptochrome circadian regulator 1.
   
 0.820
CIPC
CLOCK interacting pacemaker.
    
 0.760
BHLHE41
Basic helix-loop-helix family member e41.
    
 0.722
SIRT1
Sirtuin 1.
    
 0.713
CSNK1E
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.650
CSNK1D
Casein kinase 1 delta; Belongs to the protein kinase superfamily.
    
 0.650
MS4A12
Membrane spanning 4-domains A12.
   
  
 0.622
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.