STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB34RAB34, member RAS oncogene family. (259 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
    
 0.778
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.753
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.743
COG8
Uncharacterized protein.
    
 0.733
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.709
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
   
 0.708
EPHB4
EPH receptor B4.
    
 
 0.699
ARL1
ADP ribosylation factor like GTPase 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.676
VPS52
VPS52 subunit of GARP complex.
    
 0.655
RGP1
RGP1 homolog, RAB6A GEF complex partner 1.
    
 0.655
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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