STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDF2Stromal cell derived factor 2. (211 aa)    
Predicted Functional Partners:
DNAJB11
J domain-containing protein.
   
 0.967
SPAG1
Sperm associated antigen 1.
     
 0.741
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
      
 0.683
DNAJC10
DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.
   
 
 0.677
TMTC1
Transmembrane O-mannosyltransferase targeting cadherins 1.
      
 0.666
RRAGB
Ras related GTP binding B.
      
 0.666
SNX1
Sorting nexin 1.
    
 
 0.643
CRELD2
Cysteine rich with EGF like domains 2.
   
 
 0.632
GMPPB
GDP-mannose pyrophosphorylase B.
   
 
 0.631
SEZ6
Seizure related 6 homolog.
    
 
 0.625
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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