STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERPINB1Serpin family B member 1; Belongs to the serpin family. (391 aa)    
Predicted Functional Partners:
CASP4
Caspase 4; Belongs to the peptidase C14A family.
   
 0.774
DNPH1
2'-deoxynucleoside 5'-phosphate N-hydrolase 1.
      
 0.756
TES
Testin LIM domain protein.
    
 
 0.742
CASP5
Caspase 5; Belongs to the peptidase C14A family.
   
 0.651
CTSK
Cathepsin K; Belongs to the peptidase C1 family.
   
 0.640
F2
Coagulation factor II, thrombin; Belongs to the peptidase S1 family.
   
 0.600
ELANE
Elastase, neutrophil expressed; Belongs to the peptidase S1 family.
   
 0.585
MMP24
Matrix metallopeptidase 24.
   
 0.555
CASP1
Caspase 1; Belongs to the peptidase C14A family.
   
 0.550
ENSCSAP00000014978
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.546
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.