STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC88BCoiled-coil domain containing 88B. (1273 aa)    
Predicted Functional Partners:
DCTN2
Dynactin subunit 2.
    
 0.713
AK9
Adenylate kinase 9.
   
 
 0.629
TBC1D31
Uncharacterized protein.
   
 0.612
GPR137
G protein-coupled receptor 137.
      
 0.600
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 0.567
KCNK4
Potassium two pore domain channel subfamily K member 4; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.565
DOCK8
Dedicator of cytokinesis 8; Belongs to the DOCK family.
   
  
 0.559
MEX3C
Mex-3 RNA binding family member C.
    
 
 0.555
RASAL3
RAS protein activator like 3.
   
 0.536
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
   
 0.524
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.