STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATC1LSpermatogenesis and centriole associated 1 like. (340 aa)    
Predicted Functional Partners:
RTL6
Retrotransposon Gag like 6.
      
 0.631
CNTLN
Centlein.
      
 0.613
CFAP52
Cilia and flagella associated protein 52.
   
  
 0.596
SPATA6
Spermatogenesis associated 6.
      
 0.557
CLDN17
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.556
PCBP3
Uncharacterized protein.
    
 
 0.550
CRACR2A
Calcium release activated channel regulator 2A.
      
 0.538
SUN5
Sad1 and UNC84 domain containing 5.
   
  
 0.528
KRTCAP3
Keratinocyte associated protein 3.
      
 0.520
DEUP1
Deuterosome assembly protein 1.
      
 0.503
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.