STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C12orf40Chromosome 12 open reading frame 40. (654 aa)    
Predicted Functional Partners:
C9orf131
Chromosome 9 open reading frame 131.
      
 0.701
SPATA16
Spermatogenesis associated 16.
      
 0.674
ZFAND4
Zinc finger AN1-type containing 4.
      
 0.673
C9orf43
Chromosome 9 open reading frame 43.
      
 0.669
TULP2
TUB like protein 2; Belongs to the TUB family.
      
 0.668
CATSPER1
Cation channel sperm associated 1.
      
 0.666
PKDREJ
Polycystin family receptor for egg jelly.
      
 0.665
ESX1
Homeobox domain-containing protein.
      
 0.639
ERICH4
Glutamate rich 4.
      
 0.628
ENSCSAP00000003180
Uncharacterized protein.
      
 0.571
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.