STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CISD1CDGSH iron sulfur domain 1. (111 aa)    
Predicted Functional Partners:
CISD3
CDGSH iron sulfur domain 3.
   
  
 0.795
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
 
 0.674
CARS1
Cysteinyl-tRNA synthetase.
      
 0.638
DDB1
Damage specific DNA binding protein 1.
    
 
 0.614
CARS2
Cysteinyl-tRNA synthetase 2, mitochondrial.
      
 0.613
TOMM70
Translocase of outer mitochondrial membrane 70.
      
 0.610
IREB2
Iron responsive element binding protein 2; Belongs to the aconitase/IPM isomerase family.
   
 
 0.571
MIEN1
Migration and invasion enhancer 1.
   
  
 0.558
HSBP1L1
Heat shock factor binding protein 1 like 1.
      
 0.551
DDA1
DET1 and DDB1 associated 1.
    
 
 0.510
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.