STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAVER1Ribonucleoprotein, PTB binding 1. (884 aa)    
Predicted Functional Partners:
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.907
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.858
PTBP2
Polypyrimidine tract binding protein 2.
   
 0.804
CNOT11
CCR4-NOT transcription complex subunit 11.
   
 
 0.800
CNOT10
CCR4-NOT transcription complex subunit 10.
    
   0.773
GADD45B
Growth arrest and DNA damage inducible beta.
    
   0.771
PTBP3
Polypyrimidine tract binding protein 3.
   
 0.771
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
  
 0.755
VCL
Vinculin.
    
 
 0.723
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.699
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.