STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPIN1Spindlin 1. (262 aa)    
Predicted Functional Partners:
SPINDOC
Spindlin interactor and repressor of chromatin binding.
    
 
 0.836
YRDC
YrdC N6-threonylcarbamoyltransferase domain containing.
    
   0.690
TOPORS
TOP1 binding arginine/serine rich protein.
    
 
 0.680
CGGBP1
CGG triplet repeat binding protein 1.
    
   0.677
LOC103232063
Uncharacterized protein.
   
   0.623
PHF23
PHD finger protein 23.
      
 0.469
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
      
 0.467
MYOZ1
Myozenin 1.
  
     0.432
WDR76
WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family.
    
 
 0.414
TDRD3
Tudor domain containing 3.
      
 0.408
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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