Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEBOXSEBOX homeobox. (212 aa)    
Predicted Functional Partners:
TMEM200A
Transmembrane protein 200A.
      
 0.700
ZKSCAN2
Zinc finger with KRAB and SCAN domains 2.
   
 0.540
TBX22
T-box transcription factor 22.
    
 0.524
BHLHE23
Basic helix-loop-helix family member e23.
    
 
 0.484
LHX4
LIM homeobox 4.
   
 0.430
LRTM1
Leucine rich repeats and transmembrane domains 1.
    
 
 0.430
SLC13A2
Solute carrier family 13 member 2.
      
 0.414
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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