STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC6Coiled-coil domain containing 6. (474 aa)    
Predicted Functional Partners:
NCOA4
Nuclear receptor coactivator 4.
     
 0.960
RET
Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.
     
 0.958
PPP4R1
Protein phosphatase 4 regulatory subunit 1.
    
 
 0.931
PPP2R1A
Protein phosphatase 2 scaffold subunit Aalpha.
    
 
 0.931
PPP4C
Serine/threonine-protein phosphatase.
    
 
 0.915
LOC103243620
WRNPLPNID domain-containing protein.
    
 
 0.821
FBXO42
F-box protein 42.
    
 
 0.816
PPP4R2
Uncharacterized protein.
    
 
 0.783
FAM83B
Family with sequence similarity 83 member B.
      
 0.776
PPP2R1B
Protein phosphatase 2 scaffold subunit Abeta.
    
 
 0.772
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.