Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F13A1Coagulation factor XIII A chain. (732 aa)    
Predicted Functional Partners:
F13B
Coagulation factor XIII B chain.
    
 0.999
F2
Coagulation factor II, thrombin; Belongs to the peptidase S1 family.
    
 0.986
FGA
Fibrinogen alpha chain.
   
 0.774
HSPB1
Heat shock protein family B (small) member 1; Belongs to the small heat shock protein (HSP20) family.
    
   0.757
LYVE1
Lymphatic vessel endothelial hyaluronan receptor 1.
   
 
 0.718
MRC1
Mannose receptor C-type 1.
   
 0.675
CLEC10A
C-type lectin domain containing 10A.
   
 0.624
LOXHD1
Lipoxygenase homology domains 1.
    
 
 0.595
SLC26A5
Prestin; Motor protein that converts auditory stimuli to length changes in outer hair cells and mediates sound amplification in the mammalian hearing organ; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.573
FGG
Fibrinogen gamma chain.
   
 0.559
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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