STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP1TNF alpha induced protein 1. (316 aa)    
Predicted Functional Partners:
UBXN1
UBX domain protein 1.
   
 
 0.943
UBXN7
UBX domain protein 7.
    
 
 0.942
FAF1
Fas associated factor 1.
    
 
 0.939
KCTD13
Potassium channel tetramerization domain containing 13.
  
 
 
0.820
RND2
Rho family GTPase 2.
    
 0.795
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.772
KCTD10
Potassium channel tetramerization domain containing 10.
  
  
0.704
SMAD4
Mothers against decapentaplegic homolog.
   
 
 0.643
RND3
Rho family GTPase 3.
    
 0.626
ARIH1
RBR-type E3 ubiquitin transferase.
    
 0.546
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.