STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CABCOCO1Ciliary associated calcium binding coiled-coil 1. (208 aa)    
Predicted Functional Partners:
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
    
 0.633
CPLX4
Complexin 4.
      
 0.589
CCDC146
Coiled-coil domain containing 146.
      
 0.577
PHF13
PHD finger protein 13.
    
 0.566
TCTE1
T-complex-associated-testis-expressed 1.
    
 0.561
SDR39U1
Short chain dehydrogenase/reductase family 39U member 1.
      
 0.521
FANCM
FA complementation group M.
    
 0.505
ZNF462
Zinc finger protein 462.
    
 0.495
ZNF367
Zinc finger protein 367.
    
 0.488
TERB1
Telomere repeat binding bouquet formation protein 1.
      
 0.484
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.