STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RTKN2Rhotekin 2. (609 aa)    
Predicted Functional Partners:
RHOA
Ras homolog family member A.
    
 0.697
RHOC
Ras homolog family member C.
    
 0.697
RHOB
Ras homolog family member B.
    
 0.697
RND1
Rho family GTPase 1.
    
 0.600
RND3
Rho family GTPase 3.
    
 0.568
ARHGEF12
Rho guanine nucleotide exchange factor 12.
    
 
 0.494
RHOF
Ras homolog family member F, filopodia associated.
    
 0.492
RHO
Rhodopsin.
      
 0.483
CDC42
Cell division cycle 42.
    
 0.460
C1QBP
Complement C1q binding protein.
     
 0.452
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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