STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN11Tetraspanin. (253 aa)    
Predicted Functional Partners:
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 0.812
ENSCSAP00000001172
Uncharacterized protein.
   
 0.757
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.721
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.686
GRAMD1C
GRAM domain containing 1C.
    
   0.651
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.570
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
    
 0.568
CD9
Tetraspanin.
    
 
 0.516
CMTM6
CKLF like MARVEL transmembrane domain containing 6.
      
 0.490
TXNL4A
Thioredoxin like 4A.
   
  
 0.484
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.