STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL4A4Collagen type IV alpha 4 chain. (1692 aa)    
Predicted Functional Partners:
COL4A3
Collagen type IV alpha 3 chain.
  
 
0.924
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
    
 0.783
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.776
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
    
 0.756
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.752
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1.
      
 0.747
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 0.746
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.743
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
   
 0.715
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
    
 0.712
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.