STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL4A4Collagen type IV alpha 4 chain. (1692 aa)    
Predicted Functional Partners:
COL4A3
Collagen type IV alpha 3 chain.
  
 
0.954
CD44
CD44 molecule (Indian blood group).
    
  0.901
ENSCSAP00000016261
Uncharacterized protein.
     
  0.900
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.856
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1.
      
 0.826
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
    
 0.824
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
    
 0.821
ITGA2
Integrin subunit alpha 2; Belongs to the integrin alpha chain family.
    
 0.787
ITGA11
Integrin subunit alpha 11; Belongs to the integrin alpha chain family.
    
 0.772
ITGA10
Integrin subunit alpha 10; Belongs to the integrin alpha chain family.
    
 0.768
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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