STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGTPBP1ATP/GTP binding protein 1. (1193 aa)    
Predicted Functional Partners:
TTLL4
Tubulin tyrosine ligase like 4.
    
 
 0.722
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
      
 0.670
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
    
   0.528
TMOD1
Tropomodulin 1.
    
   0.512
NAA35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
      
 0.461
TTLL1
Tubulin tyrosine ligase like 1.
      
 0.459
BBOF1
Basal body orientation factor 1.
   
 
 0.423
LOXHD1
Lipoxygenase homology domains 1.
    
 0.415
POLR2G
RNA polymerase II subunit G.
      
 0.405
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.