STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC49A4Solute carrier family 49 member 4. (477 aa)    
Predicted Functional Partners:
CCDC150
Coiled-coil domain containing 150.
      
 0.700
SEMA5B
Semaphorin 5B.
      
 0.675
VHL
Von Hippel-Lindau tumor suppressor.
      
 0.487
EPAS1
Endothelial PAS domain protein 1.
      
 0.483
QRICH1
Glutamine rich 1.
      
 0.483
ARHGEF1
Rho guanine nucleotide exchange factor 1.
      
 0.483
IDH2
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
  
 0.482
FITM2
Fat storage inducing transmembrane protein 2.
      
 0.467
HSPBAP1
HSPB1 associated protein 1.
      
 0.461
SLC37A4
Solute carrier family 37 member 4.
   
  
 0.438
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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