STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM170BTransmembrane protein 170B. (132 aa)    
Predicted Functional Partners:
IFITM5
Interferon induced transmembrane protein 5.
      
 0.607
TMEM98
Transmembrane protein 98.
      
 0.581
TMEM45A
Transmembrane protein 45A.
      
 0.520
VSTM4
V-set and transmembrane domain containing 4.
      
 0.507
TMEM45B
Transmembrane protein 45B.
      
 0.486
TMEM88
Transmembrane protein 88.
      
 0.484
NDC1
NDC1 transmembrane nucleoporin.
      
 0.484
TMEM168
Transmembrane protein 168.
      
 0.467
TMEM106A
Transmembrane protein 106A.
      
 0.465
TMEM158
Transmembrane protein 158 (gene/pseudogene).
      
 0.465
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.