STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPEARThrombospondin type laminin G domain and EAR repeats. (644 aa)    
Predicted Functional Partners:
STRC
Stereocilin.
    
 0.730
MYH9
Myosin heavy chain 9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.720
PCDH15
Protocadherin related 15.
   
 
 0.704
CEACAM16
Carcinoembryonic antigen related cell adhesion molecule 16.
    
 0.643
WHRN
Whirlin.
    
 
 0.635
ESPN
Espin.
    
 0.628
SMPX
Small muscle protein X-linked.
      
 0.613
KLHL29
Kelch like family member 29.
  
 
 0.606
GPSM2
G protein signaling modulator 2.
     
 0.584
USH2A
Usherin.
    
 0.583
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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