STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX15Sorting nexin 15. (342 aa)    
Predicted Functional Partners:
ENSCSAP00000008208
Uncharacterized protein.
    
 
 0.774
USE1
Unconventional SNARE in the ER 1.
    
 0.765
STX18
Syntaxin 18.
   
 0.757
RINT1
RAD50 interactor 1.
   
 0.753
ZW10
Zw10 kinetochore protein.
   
 0.741
NBAS
Neuroblastoma amplified sequence.
    
 0.723
VWA5A
Von Willebrand factor A domain containing 5A.
    
 
 0.672
TMEM63C
Transmembrane protein 63C.
      
 0.665
PXMP2
Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.616
COPB2
Coatomer protein complex subunit beta 2.
    
 0.593
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.