STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATXN1Ataxin 1. (798 aa)    
Predicted Functional Partners:
CIC
Capicua transcriptional repressor.
    
 
 0.955
KAT5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.938
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.924
ATXN1L
Ataxin 1 like.
    
0.923
PUM1
Pumilio RNA binding family member 1.
     
 0.912
PUM2
Pumilio RNA binding family member 2.
     
 0.910
YWHAZ
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 
 0.806
ATXN2
Ataxin 2.
   
 
 0.778
HTT
Huntingtin.
      
 0.761
RBM17
RNA binding motif protein 17.
    
 
 0.649
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.