STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM8A1Family with sequence similarity 8 member A1. (413 aa)    
Predicted Functional Partners:
SYVN1
Synoviolin 1.
    
 0.946
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 0.917
OS9
OS9 endoplasmic reticulum lectin.
    
 0.900
ERLEC1
Endoplasmic reticulum lectin 1.
    
 
 0.796
SEL1L2
SEL1L2 adaptor subunit of ERAD E3 ligase.
    
 
 0.743
AMFR
Autocrine motility factor receptor.
    
 
 0.701
FRA10AC1
FRA10A associated CGG repeat 1.
      
 0.673
PITHD1
PITH domain containing 1.
      
 0.670
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
     
 0.654
HERPUD1
Homocysteine inducible ER protein with ubiquitin like domain 1.
    
 0.630
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.