Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RASEFRAS and EF-hand domain containing. (737 aa)    
Predicted Functional Partners:
FRMD3
FERM domain containing 3.
      
 0.756
TLE1
TLE family member 1, transcriptional corepressor.
    
 
 0.726
PSAT1
Phosphoserine aminotransferase.
      
 0.726
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
      
 0.668
SNRPN
Small nuclear ribonucleoprotein-associated protein.
      
 0.662
GNAQ
G protein subunit alpha q.
      
 0.634
FRMD5
FERM domain containing 5.
      
 0.609
SLC25A41
Solute carrier family 25 member 41; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.586
SMIM8
Small integral membrane protein 8.
      
 0.574
RABL2B
Uncharacterized protein.
   
 0.568
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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