STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TET1Tet methylcytosine dioxygenase 1. (2132 aa)    
Predicted Functional Partners:
NANOG
Nanog homeobox.
   
 
 0.703
NANOGP8
Nanog homeobox retrogene P8.
   
 
 0.703
PRM2
Protamine 2.
      
 0.697
ARID4B
AT-rich interaction domain 4B.
   
 
 0.696
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 
 0.690
PRMT5
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
      
 0.616
ZNF641
Zinc finger protein 641.
   
    0.589
ENSCSAP00000004852
Uncharacterized protein.
    
 
 0.589
TET2
Tet methylcytosine dioxygenase 2.
     
 0.587
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
 
 0.586
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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