Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCAR1Cell division cycle and apoptosis regulator 1. (1150 aa)    
Predicted Functional Partners:
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
  0.900
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.893
RBM10
RNA binding motif protein 10.
   
 0.852
U2SURP
U2 snRNP associated SURP domain containing.
   
  
 0.799
TCERG1
Transcription elongation regulator 1.
   
 
  0.788
ZYX
Zyxin.
    
   0.787
RBM5
RNA binding motif protein 5.
   
 0.745
BRD7
Bromodomain containing 7.
   
  
 0.735
FHL3
Four and a half LIM domains 3.
    
   0.717
CA7
Carbonic anhydrase 7; Belongs to the alpha-carbonic anhydrase family.
    
 
 0.705
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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