Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C12orf71Chromosome 12 open reading frame 71. (272 aa)    
Predicted Functional Partners:
YEATS4
YEATS domain containing 4.
      
 0.699
LYZL4
Lysozyme like 4; Belongs to the glycosyl hydrolase 22 family.
      
 0.593
GLS2
Glutaminase 2.
      
 0.581
MIP
Major intrinsic protein of lens fiber; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.574
LYZL6
Lysozyme like 6; Belongs to the glycosyl hydrolase 22 family.
      
 0.557
SPRYD4
SPRY domain containing 4.
      
 0.535
CPM
Carboxypeptidase M.
      
 0.413
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.413
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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