Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BHLHE41Basic helix-loop-helix family member e41. (482 aa)    
Predicted Functional Partners:
NPAS2
Neuronal PAS domain protein 2.
    
 0.990
CLOCK
Clock circadian regulator.
    
 0.987
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.983
BHLHE40
Basic helix-loop-helix family member e40.
   
0.966
PER2
Period circadian regulator 2.
    
 0.942
CRY1
Cryptochrome circadian regulator 1.
    
 
 0.928
CRY2
Cryptochrome circadian regulator 2.
    
 
 0.884
PER3
Period circadian regulator 3.
    
 0.856
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.825
GSK3B
Glycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily.
    
 
 0.804
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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