STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMNTD1Lamin tail domain containing 1. (404 aa)    
Predicted Functional Partners:
LEMD3
LEM domain containing 3.
    
 0.707
BANF1
Barrier to autointegration factor 1.
    
 0.702
RASSF8
Ras association domain family member 8.
      
 0.616
GPR87
G protein-coupled receptor 87; Belongs to the G-protein coupled receptor 1 family.
      
 0.612
EMD
Emerin.
    
 0.591
BANF2
Barrier to autointegration factor 2.
    
 0.551
WDR48
WD repeat domain 48.
      
 0.530
SUN3
Sad1 and UNC84 domain containing 3.
    
 0.523
LRRC18
Leucine rich repeat containing 18.
    
 
 0.521
NUP153
Nucleoporin 153.
    
 
 0.517
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.