STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF317Zinc finger protein 317. (595 aa)    
Predicted Functional Partners:
ZKSCAN5
Zinc finger with KRAB and SCAN domains 5.
     
 0.628
TRIM28
Tripartite motif containing 28.
   
 0.580
ENSCSAP00000014317
RRM domain-containing protein.
    
   0.543
HOXB5
Homeobox B5.
    
 
 0.527
CNDP2
Carnosine dipeptidase 2.
      
 0.523
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
   
 0.521
TUBA8
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
   0.504
MRPS18A
Mitochondrial ribosomal protein S18A.
    
  0.495
NKAPD1
NKAP domain containing 1.
    
   0.456
TRIM33
Tripartite motif containing 33.
   
 0.434
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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