Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAV1 | ITGB5 | ENSCSAP00000007138 | ENSCSAP00000004036 | Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. | Integrin beta; Belongs to the integrin beta chain family. | 0.920 |
CAV1 | SRC | ENSCSAP00000007138 | ENSCSAP00000009855 | Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. | Tyrosine-protein kinase. | 0.967 |
CAV1 | VASP | ENSCSAP00000007138 | ENSCSAP00000014874 | Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. | Vasodilator stimulated phosphoprotein; Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance, lamellipodial and filopodial dynamics, platelet activation and cell migration. Belongs to the Ena/VASP family. | 0.503 |
IBSP | ITGAV | ENSCSAP00000000656 | ENSCSAP00000008722 | Integrin binding sialoprotein. | Integrin subunit alpha V; Belongs to the integrin alpha chain family. | 0.968 |
IBSP | ITGB5 | ENSCSAP00000000656 | ENSCSAP00000004036 | Integrin binding sialoprotein. | Integrin beta; Belongs to the integrin beta chain family. | 0.937 |
IBSP | SPP1 | ENSCSAP00000000656 | ENSCSAP00000000654 | Integrin binding sialoprotein. | Secreted phosphoprotein 1. | 0.618 |
ITGAV | IBSP | ENSCSAP00000008722 | ENSCSAP00000000656 | Integrin subunit alpha V; Belongs to the integrin alpha chain family. | Integrin binding sialoprotein. | 0.968 |
ITGAV | ITGB5 | ENSCSAP00000008722 | ENSCSAP00000004036 | Integrin subunit alpha V; Belongs to the integrin alpha chain family. | Integrin beta; Belongs to the integrin beta chain family. | 0.991 |
ITGAV | PXN | ENSCSAP00000008722 | ENSCSAP00000015767 | Integrin subunit alpha V; Belongs to the integrin alpha chain family. | Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family. | 0.951 |
ITGAV | SPP1 | ENSCSAP00000008722 | ENSCSAP00000000654 | Integrin subunit alpha V; Belongs to the integrin alpha chain family. | Secreted phosphoprotein 1. | 0.971 |
ITGAV | SRC | ENSCSAP00000008722 | ENSCSAP00000009855 | Integrin subunit alpha V; Belongs to the integrin alpha chain family. | Tyrosine-protein kinase. | 0.947 |
ITGAV | TLN1 | ENSCSAP00000008722 | ENSCSAP00000006763 | Integrin subunit alpha V; Belongs to the integrin alpha chain family. | Talin 1. | 0.791 |
ITGAV | TLN2 | ENSCSAP00000008722 | ENSCSAP00000008447 | Integrin subunit alpha V; Belongs to the integrin alpha chain family. | Talin 2. | 0.763 |
ITGAV | VASP | ENSCSAP00000008722 | ENSCSAP00000014874 | Integrin subunit alpha V; Belongs to the integrin alpha chain family. | Vasodilator stimulated phosphoprotein; Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance, lamellipodial and filopodial dynamics, platelet activation and cell migration. Belongs to the Ena/VASP family. | 0.905 |
ITGAV | VTN | ENSCSAP00000008722 | ENSCSAP00000003601 | Integrin subunit alpha V; Belongs to the integrin alpha chain family. | SMB domain-containing protein. | 0.979 |
ITGB5 | CAV1 | ENSCSAP00000004036 | ENSCSAP00000007138 | Integrin beta; Belongs to the integrin beta chain family. | Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. | 0.920 |
ITGB5 | IBSP | ENSCSAP00000004036 | ENSCSAP00000000656 | Integrin beta; Belongs to the integrin beta chain family. | Integrin binding sialoprotein. | 0.937 |
ITGB5 | ITGAV | ENSCSAP00000004036 | ENSCSAP00000008722 | Integrin beta; Belongs to the integrin beta chain family. | Integrin subunit alpha V; Belongs to the integrin alpha chain family. | 0.991 |
ITGB5 | PXN | ENSCSAP00000004036 | ENSCSAP00000015767 | Integrin beta; Belongs to the integrin beta chain family. | Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family. | 0.965 |
ITGB5 | SPP1 | ENSCSAP00000004036 | ENSCSAP00000000654 | Integrin beta; Belongs to the integrin beta chain family. | Secreted phosphoprotein 1. | 0.950 |
page 1 of 4