STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMC5Transmembrane channel-like protein. (1010 aa)    
Predicted Functional Partners:
TMEM132E
Transmembrane protein 132E.
     
 0.528
UNC119
Unc-119 lipid binding chaperone.
      
 0.502
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.497
ZFC3H1
Zinc finger C3H1-type containing.
    
 
 0.491
SYNGR2
Synaptogyrin.
      
 0.489
TMEM211
Transmembrane protein 211.
     
 0.488
EFHB
EF-hand domain family member B.
    
 
 0.485
KCNH8
Cyclic nucleotide-binding domain-containing protein.
      
 0.483
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
      
 0.480
TMEM221
Uncharacterized protein.
      
 0.474
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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