STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SOX5SRY-box transcription factor 5. (763 aa)    
Predicted Functional Partners:
SOX6
SRY-box transcription factor 6.
   
 
 0.964
SOX13
SRY-box transcription factor 13.
    
 
 0.847
ZBTB20
Zinc finger and BTB domain containing 20.
    
 
 0.839
CEP85
Centrosomal protein 85.
    
   0.825
SOX11
Transcription factor SOX.
   
 0.805
COL2A1
Collagen type II alpha 1 chain.
    
 
 0.746
SATB2
DNA-binding protein SATB.
      
 0.633
FOXI2
Forkhead box I2.
    
 
 0.624
ATP2A2
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
      
 0.616
FOXP1
Fork-head domain-containing protein.
    
 
 0.604
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.