Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABT1Activator of basal transcription 1. (276 aa)    
Predicted Functional Partners:
RRP36
Ribosomal RNA processing 36.
   
 
 0.971
NGDN
Neuroguidin.
   
 
 0.918
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.906
DDX10
DEAD-box helicase 10.
   
 
 0.894
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
   
 
 0.890
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
 
 0.886
BYSL
Bystin like.
   
 
 0.885
NOP14
NOP14 nucleolar protein.
   
 
 0.884
PWP2
Uncharacterized protein.
   
 
 0.880
UTP25
UTP25 small subunit processor component.
   
 
 0.872
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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