STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZSCAN16Zinc finger and SCAN domain containing 16. (348 aa)    
Predicted Functional Partners:
ZSCAN32
Zinc finger and SCAN domain containing 32.
    
   0.592
SYTL3
Synaptotagmin like 3.
    
 
 0.566
TMEM154
Transmembrane protein 154.
      
 0.565
RFC1
Replication factor C subunit 1.
    
 0.560
ZNF446
Zinc finger protein 446.
    
   0.557
TMEM38A
Transmembrane protein 38A.
      
 0.540
ZSCAN22
Zinc finger and SCAN domain containing 22.
    
   0.512
DLGAP1
DLG associated protein 1.
      
 0.495
ZNF24
Zinc finger protein 24.
   
   0.464
NKAP
NFKB activating protein.
      
 0.461
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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