STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (692 aa)    
Predicted Functional Partners:
ZNF207
Zinc finger protein 207.
   
 
 0.944
EWSR1
EWS RNA binding protein 1.
   
 0.869
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.864
TNPO1
Transportin 1.
   
 
 0.844
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.835
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 0.817
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.800
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
   
 0.794
BRDT
Bromodomain testis associated.
   
 
 0.788
SNRPD3
Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.
   
 0.782
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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