STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCC6ATP binding cassette subfamily C member 6. (1503 aa)    
Predicted Functional Partners:
SCG5
Secretogranin V.
      
 0.855
SERPINF2
Serpin family F member 2; Belongs to the serpin family.
   
  
 0.790
ARID5B
AT-rich interaction domain 5B.
   
  
 0.701
HSD17B2
Hydroxysteroid 17-beta dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.697
GGCX
Gamma-glutamyl carboxylase.
   
 
 0.682
CUL7
Cullin 7; Belongs to the cullin family.
   
 
 0.680
PDZK1
PDZ domain containing 1.
   
 0.665
CHD7
Chromodomain helicase DNA binding protein 7.
    
 0.664
COL18A1
LAM_G_DOMAIN domain-containing protein.
      
 0.658
ECHS1
Enoyl-CoA hydratase, short chain 1; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.653
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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